Jefferson County Hotels

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Where to stay in Jefferson County

Top hotels in Alexandria Bay

Top hotels in Watertown

Top hotels in Clayton

Top hotels in Cape Vincent

The Roxy Cape Vincent

The Roxy Cape Vincent

2 out of 5
8.2/10 Very Good! (15 reviews)
HI Tibbetts Point Lighthouse - Hostel

HI Tibbetts Point Lighthouse - Hostel

2 out of 5
A tranquil hotel pool encircled by beautiful arches

Summer Getaway Sale

Sign in to get 25% or more off selected hotels, plus 1 reward night for every 10 nights you stay. Book by May 26 and travel by Sep 30, 2025. See terms*

Find out more about Jefferson County

Find out more about Jefferson County

What's Jefferson County like?

If you're looking for a place to get away, look no further than Jefferson County. Our map displays the areas and neighborhoods around all Jefferson County hotels so you can see how close you are from landmarks and attractions, and then refine your search within the larger area.

Where are the best places to stay in Jefferson County?

Here are our travelers' top 5 places to stay in Jefferson County:

Chateau Country Inn , in Clayton

  • Free breakfast • Free parking • Free WiFi • Garden

Holiday Inn Express Hotel & Suites Watertown-Thousand Island, an IHG Hotel, in Watertown

Watertown hotel with indoor pool
  • Free breakfast • Free parking • Free WiFi • Restaurant • Central location

Hilton Garden Inn Watertown/Thousand Islands, in Watertown

Watertown hotel with indoor pool, bar
  • Free parking • Free WiFi • Restaurant • Spa tub • Attentive staff

1000 Islands Harbor Hotel, in Clayton

Hotel with indoor pool, near Antique Boat Museum
  • Free parking • Free WiFi • Restaurant • Fitness center • Walkable location

Capt. Thomson's Resort, in Alexandria Bay

Riverfront hotel within easy reach of Heart Island
  • Free WiFi • Restaurant • Outdoor pool • Bar • Walkable location

What is there to see around Jefferson County?

  • Jefferson Community College (1.7 mi/2.8 km from the city center)
  • Evans Mills Speedway (8.9 mi/14.4 km from the city center)
  • Sackets Harbor Battlefield State Park (10.8 mi/17.3 km from the city center)
  • Clayton Marina (20 mi/32.1 km from the city center)
  • Scenic View Park (25 mi/40.3 km from the city center)

What is there to do around Jefferson County?

  • New York State Zoo at Thompson Park (1.6 mi/2.6 km from the city center)
  • Salmon Run Mall (2.2 mi/3.5 km from the city center)
  • Coyote Moon Vineyards (19 mi/30.6 km from the city center)
  • Antique Boat Museum (20.2 mi/32.5 km from the city center)
  • 1000 Islands River Rat Cheese (20.4 mi/32.8 km from the city center)

Other Popular Jefferson County Attractions

  • The Clayton Opera House
  • Thousand Islands Winery
  • Heart Island
  • North Sandy Pond
  • Lake Ontario

Terms and conditions

*Book by 5/26/2025 11:59 pm in hotel property local time. Stay between 4/17/2025-9/30/2025. Member Prices are available to Hotels.com™ app users and Hotels.com™ Rewards members. Limited availability, blackout periods may apply.

Hotels.com Rewards members save more, as compared to non-members shopping on Hotels.com. Members 18+. Eligible properties only. Reward Night worth average daily rate of 10 stamps (excluding taxes/fees). Taxes/fees payable on reward night. Booking exclusions apply, see terms https://ca.hotels.com/lp/b/terms-of-service?pos=HCOM_CA&locale=en_CA.